GRIIS

Paul Fabry

Paul Fabry

Ph.D. student in computer science under the direction of Prof. Jean‑François Ethier and Prof. Adrien Barton

Presentation

A family physician by training, Paul Fabry has a university and professional experience in medical informatics. As part of his PhD in computer science, he is interested in knowledge and medical processes modelling, in the organization of information in medical records using ontologies and medical terminologies, and in computer tools facilitating reflexive practice in a clinical setting.


Supervision

Publications

2298129 Journal Article Paul Fabry 1 https://www.zotero.org/styles/springer-basic-author-date-no-et-al 50 date desc year 1 1 title Fabry P 1809 https://griis.ca/wp-content/plugins/zotpress/
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Ethier J-F, Goyer F, Fabry P, Barton A (2021) The prescription of drug ontology 2.0 (PDRO): More than the sum of its parts. International Journal of Environmental Research and Public Health 18. https://doi.org/10.3390/ijerph182212025 Cite

2298129 Conference Paper Paul Fabry 1 https://www.zotero.org/styles/springer-basic-author-date-no-et-al 50 date desc year 1 1 title Fabry P 1809 https://griis.ca/wp-content/plugins/zotpress/
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Barton A, Fabry P, Ethier J-F (2024) Meaning Holism and Indeterminacy of Reference in Ontologies [FOIS 2024 DISTINGUISHED PAPER AWARD]. In: Proceedings of the 14th International Conference on Formal Ontology Information Systems (FOIS 2024). Enschede, Pays-Bas Cite Download
Fabry P, Barton A, Ethier J-F (2023) Version control for interdependent ontologies: Challenges and first propositions. In: Proceedings of the International Conference on Biomedical Ontologies 2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated Disease Data Science (OIIDDS 2023) and the FAIR Ontology Harmonization and TRUST Data Interoperability Workshop (FOHTI 2023). Brasilila, Brésil, pp 154–165 Cite
Goyer F, Fabry P, Barton A, Ethier J-F (2022) An ontology for healthcare systems. In: Proceedings of the 13th International Conference on Biomedical Ontology (ICBO 2022). Ann Arbor, États-Unis Cite
Toyoshima F, Barton A, Fabry P, Ethier J-F (2022) Representing Gender in Ontologies: A Dispositional Perspective. In: Proceedings of the 12th International Conference on Biomedical Ontology (ICBO 2021). CEUR Workshop Proceedings, Bolzano, Italie, pp 1–12 Cite Download
Fabry P, Goyer F, Barton A, Ethier J-F (2022) An informational perspective on the ontology of services. In: CEUR Workshop Proceedings Cite
Fabry P, Goyer F, Barton A, Ethier J-F (2021) An Ontological Analysis of Health Procedure Information. In: Proceedings of the 12th International Conference on Biological Ontology (ICBO 2021). CEUR Workshop Proceedings, Bolzano, Italie, pp 36–47 Cite
Barton A, Toyoshima F, Vieu L, Fabry P, Ethier J-F (2020) The Mereological Structure of Informational Entities. In: Brodaric B, Neuhaus F (eds) Proceedings of the 11th International Conference (FOIS 2020). IOS Press Cite Download
Fabry P, Barton A, Ethier J-F (2020) QUESTO – An ontology for questionnaires. In: ICBO|ODLS 2020 International Conference on Biomedical Ontologies 2020. CEUR-WS.org, Bolzano, Italie, p B.1-12 Cite Download
Fabry P, Barton A, Ethier J-F (2020) An Ontological Representation of Sex and Gender Information. In: Hastings J, Loebe F (eds) ICBO|ODLS 2020 International Conference on Biomedical Ontologies 2020. CEUR-WS.org, Bolzano, Italy, p O.1-5 Cite Download
Barton A, Fabry P, Ethier J-F (2019) A classification of instructions in drug prescriptions and pharmacist documents. In: Proceedings of the 10th International Conference on Biomedical Ontology (ICBO 2019). CEUR Workshop Proceedings, Buffalo, États-Unis, pp 1–7 Cite
Barton A, Fabry P, Lavoie L, Ethier J-F (2019) LABO: An ontology for laboratory test prescription and reporting. In: Proceedings of the Joint Ontology Workshops 2019 (JOWO 2019). Graz, Autriche, pp 1–9 Cite

Summary

Education

Master’s studies, Université de Sherbrooke, software engineering (fast-tracked to doctorate)

2nd cycle microprogram, Université de Sherbrooke, health science pedagogy

MD, University of Western Brittany, doctorate in medicine

DEA, Université Pierre et Marie Curie—Paris 6, medical informatics and communication technology

DESS, Université de Rennes 1, medical and hospital information processing